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TWikiGuest
A guest of this TWiki web, not unlike yourself. You can leave your trace behind you, just add your name in .TWikiRegistration and create your own page. Personal Preferences ...
GrantBow
Grant is a TWiki:Main/CoreTeam member. See home page at TWiki:Main/GrantBow
RichardDonkin
Richard is a TWiki:Main/CoreTeam member. See home page at TWiki:Main/RichardDonkin
AndreaSterbini
I am a TWiki:Main/CoreTeam member (I am guilty of the Plugins developement ; ) ) See home page at TWiki:Main/AndreaSterbini Main.AndreaSterbini 13 Dec 2001
JohnTalintyre
John is a TWiki:Codev/CoreTeam member. See home page at TWiki:Main/JohnTalintyre
MikeMannix
Mike is a TWiki:Codev/CoreTeam member. See home page at TWiki:Main/MikeMannix
NicholasLee
Nicholas is a TWiki:Codev/CoreTeam member. See home page at TWiki:Main/NicholasLee
PeterThoeny
* Name: Peter Thoeny * Email: Peter #64;Thoeny.com * Comment: Peter is the author of TWiki and therefore a TWiki:Codev/CoreTeam member. See home page at TWiki ...
KevinKinnell
Kevin used to be a TWiki:Codev/CoreTeam member. See home page at TWiki:Main/KevinKinnell
TWikiVariables
See .TWikiVariables
TWikiPreferences
The site level preferences are located in .TWikiPreferences Main.PeterThoeny 20 Dec 2003
TestUser
* Name: Test User * Email: dale.plummer #64;vanderbilt.edu * Phone: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size of ...
RetrievalDatasets
Methods of Retrieving Datasets Most of the datasets on this site are in the S dumpdata format (file suffix of .sdd) and R compressed save() file format (suffix of ...
TestFool
* Name: Test Fool * Email: dale.plummer #64;vanderbilt.edu * Phone Number: * Comment: Cool! Personal Preferences (details in .TWikiVariables) * Horizontal ...
SasMacros
SAS Macros for Assisting with Survival and Risk Analysis, and Some SAS Procedures Useful for Multivariable Modeling Several unsupported SAS macros written by Harrell ...
RmsShortCourseArchive
Archive from the 2 4 June 2003 Regression Modeling Strategies Short Courses * Final S Plus script * Corrected final S Plus script Main.FrankHarrell 01 Feb ...
PrereqComp
Computing Background Information and Prerequisites * Computers and Computer Languages Main.FrankHarrell 01 Feb 2004
ProgramingPrereq
Programming Prerequisites for Statistical Computing Courses To take a full course in statistical computing you must have learned and used a computer language such ...
HeidiHamm
* Name: Heidi Hamm * Email: heidi.hamm #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size ...
RmsLrmDisc
Logistic Regression Discussion Board Main.FrankHarrell 04 Feb 2004
RmsShortCourseDisc
Regression Modeling Strategies Short Course Discussion Board Main.FrankHarrell 04 Feb 2004
RmsMIDisc
Multiple Imputation Discussion Board Main.FrankHarrell 04 Feb 2004
PatriciaHarrison
* Name: Patricia Harrison * Email: patricia.harrison #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) ...
HiroK
* Name: Hiroyuki KOBAYASHI * Email: hiro.kobayashi #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * ...
JohnMorris
* Name: John Morris * Email: john.morris #64;vanderbilt.edu * Phone Number: 6 0176 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
LicenseAck
Software in the Hmisc and Design libraries is Copyright (C) 1991 2004 by Frank E Harrell Jr This is free software; you can redistribute it and/or modify it under ...
OtherSFunDoc
A variety of functions for correspondence analysis are available from Bernard Perbal of the Centre de Recherche Public Centre Universitaire, Luxenbourg (E mail: ...
SBooks
Thanks to Stephen Smith, James B. Ramsey, Frank e Harrell, F. Tusell, Renaud Lancelot, Nick Ellis and Pat Burns for their helpful and quick replies. The summary of ...
OtherSFunctions
Other S Functions A variety of functions for correspondence analysis are available from Bernard Perbal of the Centre de Recherche Public Centre Universitaire, Luxenbourg ...
Outlook2MBOX
Exporting Microsoft Outlook Email Folders and Contacts into .mbox and .vcard Format Below are step by step instructions you can follow to reliably export specific ...
HeidiSmith
* Name: Heidi Smith * Email: heidi.beverley #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
CharlesLeys
* Name: Charles Leys * Email: Charles.Leys #64;vanderbilt.edu * Phone Number: 615 322 8453 * Comment: Personal Preferences (details in .TWikiVariables) ...
NotificationPluginListTemplate
NotificationPluginListTemplate Topic immediate notifications Web immediate notifications Regex immediate notifications Topic notifications Web notifications ...
NEW - 20 Feb 2004 - 09:12 by tarzan
LacLinux
* Name: LAC Linux * Email: support #64;laclinux.com * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size of ...
StatCompConcepts
Statistical Computing and Graphics Concepts to Master 1 Difference between a functional language with live access to data and a procedural or macro language ...
DistributionsScript
options(digits=3) # Generate 10 random normal observations with mean 80, s.d. 15 rnorm(10, 80, 15) # Re issue this command multiple times to see new sets of random ...
AmrutaParekh
* Name: Amruta Parekh * Email: amruta.parekh #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
RmsGenDisc
General Modeling Issues Discussion Board What to Do with a Dataset that is Too Small? John Fieberg (John.Fieberg #64;dnr.state.mn.us) asked the following on 2 Mar ...
JohnFieberg
* Name: John Fieberg * Email: John.Fieberg #64;dnr.state.mn.us * Phone Number: 651 296 2704 * Comment: Personal Preferences (details in .TWikiVariables) ...
JeremyNorris
* Name: Jeremy Norris * Email: j.norris #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
AllisonBeatty
* Name: Allison Beatty * Email: allison.beatty #64;vanderbilt.edu * Phone Number: 3 8695 * Comment: Personal Preferences (details in .TWikiVariables) ...
SasAverageProgramTemplate
title; option pageno=1; libname d "c:\data\preavg"; libname da "c:\data\avg"; *Merge all the data together. New and old data. So that we will have a complete data ...
RDBscript
A Mockup of an R (or S Plus) Script for Specifying a Research Database # Institutional variable definitions used as defaults for all projects # Will usually be in ...
BrookeRawlins
* Name: Brooke Rawlins * Email: brooke.rawlins #64;vanderbilt.edu * Phone Number: 343 5757 * Comment: Personal Preferences (details in .TWikiVariables) ...
JaneyWang
* Name: Janey Wang * Email: wang #64;chgr.mc.vanderbilt.edu * Phone Number: 2 4321 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
LianhongTang
* Name: Lianhong Tang * Email: l.tang #64;vanderbilt.edu * Phone Number: 6 2737 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
JenniBlackford
* Name: Jenni Blackford * Email: Jenni.Blackford #64;Vanderbilt.edu * Phone Number: 343 0715 * Comment: Personal Preferences (details in .TWikiVariables ...
SorenaNadaf
* Name: Sorena Nadaf * Email: s.nadaf #64;vanderbilt.edu * Phone Number: 615 936 3323 * Comment: Director of Informatics Technology, CIO Vanderbilt ...
JulieAnnHardin
* Name: Julie Ann Hardin * Email: julie.a.hardin #64;vanderbilt.edu * Phone Number: 936 2804 * Comment: Personal Preferences (details in .TWikiVariables ...
EdShultz
* Name: Ed Shultz * Email: ed.shultz #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size ...
ChuckMatthews
* Name: chuck matthews * Email: charles.matthews #64;vanderbilt.edu * Phone Number: 936.2145 * Comment: Personal Preferences (details in .TWikiVariables ...
LyndaLane
* Name: Lynda Lane * Email: lynda.lane #64;vanderbilt.edu * Phone Number: 322 2390 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
TomCaldwell
* Name: Tom Caldwell * Email: tom.caldwell #64;vanderbilt.edu * Phone Number: 936 2740 * Comment: Personal Preferences (details in .TWikiVariables) * ...
SusanConner
* Name: Susan Conner * Email: susan.r.conner #64;vanderbilt.edu * Phone Number: 322 2004 * Comment: Personal Preferences (details in .TWikiVariables) ...
VictorWeber
* Name: Victor Weber * Email: victor.f.weber #64;vanderbilt.edu * Phone Number: 322 2001 * Comment: Personal Preferences (details in .TWikiVariables) ...
SamuelTrentRosenbloom
* Name: Samuel Trent Rosenbloom * Email: trent.rosenbloom #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables ...
RichardUrbano
* Name: Richard Urbano * Email: richard.urbano #64;vanderbilt.edu * Phone Number: 615.322.7418 * Comment: Personal Preferences (details in .TWikiVariables ...
UnixPre5HmiscDesign
cd /tmp rm rf Hmisc Design Hmisc.zip Design.zip mkdir Hmisc cd ~/S/Hmisc cp p *.r *.f *.c /tmp/Hmisc cp p readme.txt /tmp/Hmisc/README cd /tmp/Hmisc mkdir .Data ...
Splus6HmiscDesign
cp up ~/S/Hmisc/S.dll Hmisc.windows.dll cp up ~/S/Design/S.dll Design.windows.dll cd /usr/local/splus/library rm f ~/biostat/s/library/splus6/*intel* zip r ~/biostat ...
StanleyHiggins
* Name: Stanley Higgins * Email: stanley.higgins #64;vanderbilt.edu * Phone Number: 615 343 4762 * Comment: Personal Preferences (details in .TWikiVariables ...
HuiCai
* Name: Hui Cai * Email: hui.cai #64;vanderbilt.edu * Phone Number: 936 3468 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
JohnJohnson
* Name: John Johnson * Email: jjohnson #64;jmchd.com * Phone Number: 731 927 8535 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
JulesLoos
* Name: Jules Loos * Email: Jules.Loos #64;NetZero.com * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size ...
NbsFindings
Summary of Research Findings An important finding of our studies concerns the relationship between proliferative breast disease and breast cancer. (New England Journal ...
EwoutSteyerberg
* Name: Ewout Steyerberg * Email: E.Steyerberg #64;ErasmusMC.nl * Phone Number: 31 10 408 7053 * Comment: Personal Preferences (details in .TWikiVariables ...
OsmanAlRadi
* Name: Osman Al Radi * Email: osman.al.radi #64;utoronto.ca * Phone Number: 416 920 9505 * Comment: Personal Preferences (details in .TWikiVariables) ...
XemacsPclCvs
Note: This documentation comes from the PCL CVS source distribution. I've rearranged the chapters in order of importance. Main.JeffreyHorner 4. Getting started This ...
DebabrataMidya
* Name: Debabrata Midya * Email: Debabrata.Midya #64;commerce.nsw.gov.au * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) ...
ServerQuote
This is a 2U rack mount server. It would have 160GB of SATA disk consisting of two mirrored drives. The drives are swappable from the front of the case but the system ...
ThomasMoon
* Name: Thomas Moon * Email: tmoon #64;exelixis.com * Phone Number: 650.837.7222 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
UgradDisc
Discussion Board for Undergraduate Biostatistics/Biomathematics Program
DistanceCheckSheet
* Microarray or mass spec? * Average by sample location? * Do PROC MEANS on each patient to verify normalization * Create/verify peak definition file ...
TwikiTroubleshoting
Notes on trouble shooting Twiki problems 20 Apr 2004 a user recently got this error message when trying to save a change. Biostatistics TWiki . Main . ReduceDMC ...
ReneeStiles
* Name: Renee Stiles * Email: renee.stiles #64;vanderbilt.edu * Phone Number: 3225918 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
ToDoXforms
Information on Xforms See http://www.w3schools.com/xml/default.asp for a nice tutorial on xforms. This is (finally) something I can understand without having to plow ...
MassSpecDescript
Mass Spectrometry Tutorials Tutorials from Vanderbilt's Mass Spectrometry Research Center. Main.DeanBillheimer 22 Apr 2004
KonqCervisiaCvs
A Quick Howto for Konqueror/Cervisia/CVS This brief tutoiral will teach you how to check out the rreport module from the Biostat server. You must have installed Cervisia ...
OncoreReview
Demonstration and Review of PercipEnz Oncore System Interspersed are some responses (marked DM) from David DeMets, and Sorena Nadaf (marked SN), key personnel involved ...
MetaclinicReview
Demonstration and Review of Metaclinic System Basis Software Oracle, Apache, mod_perl (increases speed by maintaining Perl and metadata in memory), Javascript Features ...
ChangelogDesign
Design Package Change Log This change log is now handled by CVS. See it here. 1996 1997 1998 1999 2000 2001 2002 2003 2004 #LoG96 1996 Submitted ...
ChangelogHmisc
Hmisc Package Change Log This change log is now handled by CVS. See it here. 1996 1997 1998 1999 2000 2001 2002 2003 2004 #LoG96 1996 Submitted ...
MeharryVU
Meharry Vanderbilt Alliance * Pre term intervention and disparities grant proposal
PretermMinutes
Preterm Meeting Minutes
PretermDisc
Pre term Discussions and Questions
ReduceImport
Steps for Creating Analysis Files Importing SAS Data Library 1 Store SAS macro exportlib.sas in ~/sas/exportlib.sas 1 In the project area for the current report ...
WendyReid
This is your own TWiki User page. Edit the template as you see fit. Wendy Reid, CCRPComputer Systems Analyst E mail: wendy.reid@vanderbilt.edu Phone ...
HarrisReview
Review of Paul Harris' System Goal Be able to implement data management tools for a wide variety of studies, and to build a toolset that uses best security practices ...
StatModelBookDupontPreface
Preface The purpose of this text is to enable biomedical researchers to use a number of advanced statistical methods that have proven valuable in medical research ...
PolicyEquip
Office Equipment Policies Printers and Similar Peripherals The department supports high end network printers and encourages members to use duplex printing whenever ...
SemWorkIdeas
Ideas for Seminar and Workshop Topics * Formulating a model * Measuring predictive performance * Seminar or discussion of mixed models helpful, in either ...
SylpheedWentAway
* Download this folder from the template account on the biostat server * .sylpheed/* * Run sylpheed to configure the account, specifying their own ID in place ...
RobinDriver
* Name: Robin Driver * Email: robin.e.driver #64;vanderbilt.edu * Phone Number: 936 3312 * Comment: Personal Preferences (details in .TWikiVariables) ...
Handouts
Handouts for Presentations * Frank Harrell
FacSoftware
Public Domain Software Available for Download from Vanderbilt Biostatistics * Power and Sample Size Estimation Software * Software for Converting Relative Risks ...
StatProbsAvoid
Miscellaneous Statistics Problems to Avoid Descriptive Statistics * Mean #177; S.D. virtually assumes normality * Mean #177; S.E. assumes normality unless ...
JeremyRobertsNotifyList
JeremyRobertsNotifyList Topic immediate notifications * Main.GeneralWfccmDesign Web immediate notifications Regex immediate notifications * .* Ww fccm.* ...
JeffreyHornerTestBibTool
Medical Citations for Statistical Issues General:
PhOSCoReview
PhOSCo PhOSCo is a complete electronic data capture system for multi site clinical trials that has been in use for seven years. It is written in object oriented Java ...
JeremyRoberts
* Name: Jeremy Roberts * Email: j.roberts #64;vanderbilt.edu * Phone Number: Please contact me via email. * JeremyRobertsNotifyList * MicroArrayMassSpec ...
WfccmTestingGuidelines
Please put your feedback on this system. I think that this will work, but I am open to better solutions. Jeremy. At this point in time, use the console tester to write ...
MiscSplineEx
Miscellaneous Examples of S Code for Spline Fits Note: These examples assume that the Hmisc and Design packages are attached. * Linear Spline Basis Functions and ...
CoxsimVarypredictors
Prediction Error in Cox Models Varying Number of Predictors This program runs Cox fits of simulated data with exponential survival and 1 30 covariables. Each covariable ...
SexamplesMisc
Miscellaneous S Examples * Graphical Demo of Numerical Differentiation * Simulate Difference in Life Expectancy for Mixed Exponential/Weibull Distribution ...
WindowsUtilities
Windows Utility Software * wget program for Windows, a command line utility for downloading files from the WWW * Exporting Microsoft Outlook mailboxes * GnuPG ...
GnupgInstructions
GnuPG Privacy Guard Instructions These instructions tell you how to install and configure the high security free and open source encryption/decryption software called ...
RusageInstruct
Overall Miscellaneous Usage Instructions for Our R packages To load the packages, use one of these commands: library(Hmisc) # if using Hmisc without using Design ...
SarahLingo
* Name: Sarah Lingo * Email: sarah.j.lingo #64;vanderbilt.edu * Phone Number: 615 343 4104 * Comment: Personal Preferences (details in .TWikiVariables) ...
WfccmCommentingGuidelines
Commenting Guidelines * Add class/function header at time of creation * Use summary to describe a function/class. * Use value to describe a property ...
DavidCrosslin
* Name: David Crosslin * Email: david.crosslin #64;duke.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
WfccmExceptionCodes
* Copy and Paste will work * WfccmExceptionCodes Creation error "\n Failure when trying to create " this.GetType().ToString() " `" this.name "'!" Add row ...
Puzzler1
Binary Response, Three Potential Predictors, Independent Observations In a hypothetical study, a sample of 500 subjects had three potential predictors measured: age ...
DonHong
Don Hong, Ph.D. (CV) Visiting Professor of Biostatistics, VUProfessor of Mathematics, ETSU Email: don.hong@vanderbilt.edu Phone: 615.936.1415 Fax: 615.936 ...
CatherineSmith
* Name: Catherine Smith * Email: catherine.m.smith #64;vanderbilt.edu * Phone Number: 3 1827 * Comment: Personal Preferences (details in .TWikiVariables ...
OpenofficeFrontend
MySQL tools * mysqlnavigator use apt get install mysql navigator Using OpenOffice as a front end to MySQL database using ODBC OpenOffice is running on user's ...
WilliamObremskey
* Name: William Obremskey * Email: william.obremskey #64;vanderbilt.edu * Phone Number: 615 936 0112 * Comment: WilliamObremskeyNotifyPage Personal Preferences ...
WilliamObremskeyNotifyPage
WilliamObremskeyNotifyPage Topic immediate notifications Web immediate notifications Regex immediate notifications Topic notifications * Main.CogTrauma Web ...
CancerBiology
Department of Cancer Biology * Phase I Trial of Daily Intravenous SJG 136 in Patients with Advanced Solid Tumors
RdmIssues
Some Issues and Current Recommendations Regarding Research Data Management, for Principal Investigators There are many approaches to implementing a data management ...
TWikiGroupTemplate
* Set GROUP = , Main.Others... * Set ALLOWTOPICCHANGE = Related topics: , TWikiGroups, .TWikiAccessControl
WfccmRequirements
Requirements Statement The software to be designed will control the generation of scores to be used is the distance analysis of genes and proteins via WFCCM. The program ...
LynnMatrisian
* Name: Lynn Matrisian * Email: lynn.matrisian #64;vanderbilt.edu * Phone Number: (615)343 3413 * Comment: Personal Preferences (details in .TWikiVariables ...
AnnMarieFlores
* Name: Ann Marie Flores * Email: aflores #64;mmc.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size ...
MikeCalder
* Name: Mike Calder * Email: ceo at phosco.com * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size of text ...
STBRsylConcepts
Section 1: Introduction to Statistical Concepts Instructor: Frank Harrell Statistical inference is the process of drawing general conclusions from specific studies ...
PremedEduc
Needed Changes in Medical School and Pre Med Curricula Quoted from Santana S: Educators seek curriculum revision to reflect changes in sciences, Reporter 13 No. 11 ...
WfccmDataSubmissionGuidelines
The following are the guidelines for submitting data for analysis. These guidelines are established to make the process better for both sides. Following the guidelines ...
K3bFix
K3B will complain about not having any SCSI devices if the cdwriter is using ATAPI. It also may give errors about some of the packages it uses, including problems ...
MaMsAdditionalTools
Additional Tools * InfoLog.exe: Info Score generator * WGALog.exe: WGA Score generator * sam2003 07 07_v1.21.zip: SAM excel score generator * msjavx86 ...
YuShyrWfccmSemQ
Questions for Discussion From FrankHarrell 1 Methods based on filtering out "winners" result in effect estimates that are biased high. Likewise, stepwise variable ...
WfccmDesignWorkArea
Survival Design 1 create timediff variable from date of diagnosis to date of death in days. 1 Clean the data by changing the log 10 data from continous data ...
TeresaGarland
* Name: Teresa Garland * Email: teresa.d.garland #64;vanderbilt.edu * Phone Number: 2 2001 * Comment: Personal Preferences (details in .TWikiVariables) ...
MassionMDA
Massion MDA Mouse Study * Start Date: 31 August 2004 * Finish Date: 20 September 2004 * Research Drive Directory: /Massion/040831/ * Data Type: MassSpec ...
STBRannounce
The Department of Biostatistics Vanderbilt University School of Medicine Statistical Thinking in Biomedical Research October 7, 14, 21, 28, November 4, 11, 18 2004 ...
ProDevGrantDBProject
Database Specification The department has decided to build a database to handle tracking of personnel's professional development and percent effort. The design of ...
WfccmClassTemplate
ClassName Public Methods Properties Protected Methods Private Methods Virtual Methods Protected Members Exceptions Rationale Remarks
SaraSchwartzSinglePatientClass
Single Patient Classification * Start Date: 16 Sep 2004 * Research Drive Directory: /Schwartz/20040916/ * Data Type: MassSpec * Notes: Classification of ...
YanqinFan
* Name: Yanqin Fan * Email: yanqin.fan #64;vanderbilt.edu * Phone Number: 322 3796 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
AnaRegina
* Name: Ana Regina * Email: ana.andrade #64;vanderbilt.edu * Phone Number: 2 5846 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
ChenchalS
* Name: Chenchal Subraveti * Email: chenchal.subraveti #64;vanderbilt.edu * Phone Number: 936 2885 * Comment: Personal Preferences (details in .TWikiVariables ...
StatThinkSchedule
2004 Schedule All classes are held Thursday evenings 5:30pm 7:00pm. Section Date Instructor 1 Oct 7 Harrell 2 Oct 14 Koyama 3 Oct 21 Wang 4 Oct 28 ...
STBRlistOrganizer
Checklist for Course Organizer 1 Order enough copies of Essential Medical Statistics, Second Edition by Betty R Kirkwood and Jonathan AC Sterne (Blackwell Publishing ...
STBRlistParticipants
Statistical Thinking in Biomedical Research Checklist for Participants * Purchase book from medical center bookstore * Check schedule; some sections are reordered ...
AbstractPolicies
Policies for Participation in Abstract Submission For biostatisticians funded by a project or by the collaboration plan to work on an abstract we require a minimum ...
PaulSRedelheim
* Name: Paul S. Redelheim * Email: paul.s.redelheim #64;vanderbilt.edu * Phone Number: 343 5932 * Comment: Personal Preferences (details in .TWikiVariables ...
JohnGrantham
* Name: John Grantham * Email: john.grantham #64;vanderbilt.edu * Phone Number: 615 396 6198 * Comment: Personal Preferences (details in .TWikiVariables ...
STBRnotesInstructors
Notes for Instructors of Statistical Thinking in Biomedical Research The short course is designed so that the sessions are for the most part independent. This allows ...
WfccmSurvivalMethod
Survival Design 1 Create timediff variable from date of diagnosis to date of death in days. 1 Create flag variable from status at event time. 1 = dead, 0 = alive ...
NobuhikoKataoka
* Name: Nobuhiko Kataoka * Email: nobuhiko.kataoka #64;vanderbilt.edu * Phone Number: 6 0222 * Comment: Personal Preferences (details in .TWikiVariables ...
EmpLikeEx1
Example: Simulation Study of elm vs. Bootstrap ## Define elm function and its service functions f mu, 2, mean) cat('\nRight Tail Areas:\n\n') apply(cl ,,'upper' ...
ReviMathew
* Name: Revi Mathew * Email: revi.mathew #64;vanderbilt.edu * Phone Number: 615 3227427 * Comment: Personal Preferences (details in .TWikiVariables) ...
WfccmAlgorithmPermutationTTest
Permutation TTest Algorithm Performed on a set of non negative numbers and labels of size N. There must be two specific labels. Label 1 must be 1 and label 2 must ...
MarnettStudy
Marnett 2 Timepoint Study * Start Date: 20 October 2004 * Due Date: 25 October 2004 * Research Drive Directory: /Marnett/041005 * Data Type: MicroArray ...
DiffTimePoint
Susan Study * Start Date: 09 Sep 2004 * Research Drive Directory: Kasper/040603/ * Data Type: MassSpec * Notes: * Status: 1 normal: 100% complete ...
FindingIpAddress
* For Windows: * For KDE Linux (this is generally what everyone in the department runs): * From the Linux Command line: Run the following command: ...
S6WindowsUpdateNotes
Fredrik Lundgren kindly provided the following notes on updating S source code for S Plus 6.x on Windows systems. In 'Professional Edition Version 6.0.3 Release 2 ...
GeorgeDing
* Name: George Ding * Email: george.ding #64;vanderbilt.edu * Phone Number: 322 5256 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
STBRsylDesign
Section 4: Experimental Design and Analyzing Serial Measurements Instructor: This section introduces the principles of experimental design as applied to biomedical ...
LatoshaCraig
* Name: Latosha Craig * Email: latosha.craig #64;vanderbilt.edu * Phone Number: 322 5089 * Comment: Personal Preferences (details in .TWikiVariables) ...
LethaWoods
* Name: letha woods * Email: letha.woods #64;vanderbilt.edu * Phone Number: 2 4386 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
DavidRoyal
* Name: David Royal * Email: david.royal #64;vanderbilt.edu * Phone Number: 2 2694 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
ProcsStatCollabs
Procedures and Notes for Statisticians Taking Part in the Collaboration Plan * Be aware of future grant deadlines and take the initiative to remind investigators ...
JournalClubNephrology
Nephrology Journal Club 9 Nov 2004 Background Handout * Tepel M, van der Giet M, et al: Prevention of radiographic contrast agent induced reductions in renal ...
SoftwareRecs
Statistical Software Recommendations * Unfortunately learning time is directly proportional to power and flexibility of software * Full power and flexibility ...
ThinkSyllabus
Statistical Thinking in Biomedical Research Schedule Note: Measuring change is currently listed as a topic in both Sections 1 and 5. It will only be briefly discussed ...
SaeMergeSideEffects
Side Effects of Merging SAE: 1 Low level term name is missing in CRF data therefore it is substituted by AEVTX variable which will appear in capital letters in ...
ReviewTepel04
Review of Tepel et al, NEJM 2000;343:180 4 Biostatistical Reviewer: FrankHarrell This paper demonstrates that even in a premier journal, statistical reviews are frequently ...
JohnOates
* Name: John Oates * Email: john.oates #64;vanderbilt.edu * Phone Number: 615 343 4845 * Comment: Personal Preferences (details in .TWikiVariables) * ...
OctavioRuiz
* Name: Octavio Ruiz * Email: octavio.ruiz #64;vanderbilt.edu * Phone Number: 3435683 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
MishoSimovic
* Name: Misho Simovic * Email: mmcvuniv #64;hotmail.com * Phone Number: 363 6425 (pager) * Comment: Personal Preferences (details in .TWikiVariables) ...
ReviewBakris04
Review of Bakris et al, Kidney International 2004 65:1991 2002 Biostatistical Reviewier: FrankHarrell This is a meta analysis of randomized clinical trials with at ...
StephenDeppen
* Name: Stephen Deppen * Email: steve.deppen #64;vanderbilt.edu * Phone Number: 3 6284 * Comment: Database Analyst in Department of Nursing. Working with ...
STBRsylEffectEvidence
Section 5: Measuring Effects and Quantifying Evidence in Biomedical Research Instructor: This section introduces commonly used measures of frequency and effect in ...
CritiqueMRCHypertension
Critique of Medical Research Council Trial of Treatment of Hypertension in Older Adults, BMJ 304:405 412, 1992 Minor Problems 1 Continuous variables were not used ...
StephenSennSem
Department of Biostatistics Seminar Individual Response to Treatment: Theranostics Between Hope and Hype Stephen Senn, Ph.D. Department of Statistics, University ...
MelanomaStudy
Melanoma Study * Start Date: 04 Oct 2004 * Research Drive Directory: /kelley/041004/original * Data Type: MassSpec * Notes: * Status: 100% Output ...
BillSnyder
* Name: Bill Snyder * Email: william.snyder #64;vanderbilt.edu * Phone Number: 2 4747 * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal ...
DMCDirStruct
Project Directory Structure for DMC Reporting by the Vanderbilt Statistical Analysis Center For a project named X use the following structure on workstations and the ...
WfccmMissedValues
MissedValues Note: This class's structure is dependent entirely on DistanceReport.WriteMissedColumn() function Public Members * highlightRuns Arraylist of highlighted ...
WfccmSummaryPanel
SummaryPanel Public Methods * SummaryPanel() Default constructor * SummaryPanel(SummaryPercentages) create a new Summary panel with the given percentages ...
WfccmChartPanel
ChartPanel Public Methods * saveImage(String imgName) saves image of the chart (as a PNG file) to the given image name * setDimensions(float top, bottom, ...
WfccmDataContainer
DataContainer Public Methods * DataContainer(DataContainer) Copy constructer. * AddColumn(string) Appends a new column of data, sets the name, and returns ...
WfccmInformationSet
InformationSet Parent: DataContainer Public * SetDataPoint(int, int, string) Set the data at that point. * GetDataPoint(int, int) Gets the data at that ...
WfccmFilteredScore
FilteredScore Parent: Score Public Methods * FilteredScore(Score, CriteriaSet) Filters a score according to the criteria set. Creates the numPass column. ...
WfccmScoreExpression
ScoreExpression Parent: Score Public Methods * GenerateScores(DataSet, DataGrouping) defaults to ignore zeroes * GenerateScores(DataSet, DataGrouping, bool ...
WfccmAlgorithmFDR
False Discovery Rate Algorithm Calculate adjusted p values using False Discovery Rate Controlling Procedures. FDR Algorithm predefined values: subSize of data ...
WfccmAlgorithmFisher
Fisher Algorithm Performed on a set of non negative numbers and labels of size N. There must be two specific labels. Label 1 must be 1 and label 2 must be 2. There ...
WfccmCutoffManager
CutoffManager Parent: CriteriaManager Public Methods * CutoffManager(CutoffManager) The copy constructor. * Add(string, string, double) Adds a score name ...
WfccmTopnManager
TopNManager Parent: CriteriaManager Public Members * TopNManager(TopNManager) The copy constructor. * Add(string, string, double) Adds a score name, operator ...
WfccmCombinationManager
CombinationManager Public Methods * SetBases(ArrayList of int) Sets the sizes of the bases. * Arraylist GetCombination(int) Returns the 0 base indices that ...
WfccmExpression
Expression Public Methods * Expression(string) Creation constructor. Sets function to the passed string, checks the validity of the function and converts to ...
WfccmDistanceResult
DistanceResult Public Members * FilteredScores List of ids, numPass and the modifiers. * CriteriaSet criteria * DistanceOutput train * DistanceOutput ...
WfccmSummaryModule
Summary Public Methods * ScoreSummary(ArrayList) Returns an InformationSet that summarizes all of the Scores given. * ScoreSummary(Score, ...) ScoreSummary ...
WfccmPartitionedDataSet
PartitionedDataSet Public Methods * PartitionedDataSet(string) Constructor that takes the path to the DataSet. * PartitionedDataSet(string, int) Constructor ...
WfccmProjectData
ProjectData Public * Collection of DataSetInfo * string working directory * class DataSetInfo * path for data set * path for score set ...
WfccmMissedChart
MissedChart Public Methods * MissedChart(MissedValues) creates a new missed chart to visualize the given object (can be null) Properties * InfoSet The ...
WfccmInformationPane
InformationPane Public Methods * ProcessTag() Function that changes contents after a new observation has been specified (must be called separately because ...
MassionJamshedPreinvasive
Massion/Jamshed Preinvasive Study * Start Date: 14 Apr 2004 (Continuation) * Research Drive Directory: /Massion/040415 * preinvasive data set (avg_log10 ...
WfccmCriteriaManagerPanel
CriteriaManagerPanel Public Methods * loadCM(CriteriaManager, ArrayList, bool) Takes the CriteriaManager to load, a list of score names, and whether or not the ...
WfccmDataGroupingPanel
DataGroupingPanel Public Methods * loadDG(DataSetInfo, DataGrouping, bool, bool) Takes the data information, the grouping to load, and whether the grouping is ...
Number of topics: 200
Topic revision: r1 - 14 May 2019, DalePlummer
 

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