ClinicAnalyses


2017 December 21
Paul Slocum, OB/GYN Fellow
* "The project is evaluating two groups of patients. A group with intrinsic sphincter deficiency (isd as defined by Uro dynamic parameters) and a group with
2017 December 14
r490 - 14 Dec 2017 - 10:53 by !AmyPerkins
Roger20Lewis
TIME PERSONS/EVENT MEETING LOCATION
8:30 9:15AM * E.M. Group Meeting Alan Storrow, Wes Self,Chris Lindsell Matt Semler, Todd Rice Biostatistics Garden Room
*8:30 9:15AM * Emergency Medical Group Meeting Alan Storrow, Wes Self,Chris Lindsell Matt Semler, Todd Rice Biostatistics Garden Room
9:30 10:00AM 1. 2. Biostatistics Conference Room 11105
* 9:30 10:00AM
Faculty 1. Frank Harrell 2. Biostatistics Conference Room 11105
10:00 10:30AM 1. 2. Biostatistics Conference Room 11105
r8 - 14 Dec 2017 - 09:45 by !KathrynStoltzfus
WednesdayClinicNotes
* "Dr. Heidi J Silver is the PI on an IRB approved retrospective study on sex differences in sarcopenia surgical outcomes. We would like to discuss data that
* The cohort of interest includes subjects with surgery for benign tumors or malignant tumors. The analysis will separate out these two groups. If someone h
* Several outcomes are of interest dichotomous ones such as ED revisit, rehospitalization, death will be modeled using logistic regression; time to event ou
* For all models, clinical knowledge should guide the choice of potential confounders to include in the model.
* This project should fit in a standard 90 hour VICTR voucher. approved.
Carsen Petersen, Registered dietitian, MS student
r565 - 13 Dec 2017 - 13:54 by !CathyJenkins
WednesdaySeminarSeries
December 6 Prescriber profiling in the child welfare system and its challenges Rameela Chandrasekhar TBD
December 13 TBD Dandan Liu TBD
December 13 TBD Postponed TBD
December 20 NO SEMINAR Winter break
r326 - 12 Dec 2017 - 12:03 by !KathrynStoltzfus
Clinics
* Thursday Amy Perkins, Jennifer Morse
* Friday Dan Ayers, Alex Zhao, Tatsuki Koyama, Chris Slaughter; Bryan Shephard
* Friday Dan Ayers, Alex Zhao, Tatsuki Koyama, Chris Slaughter; Bryan Shephard, Cathy Jenkins
r107 - 12 Dec 2017 - 10:20 by !CathyJenkins
FHTools
* R: Data manipulation and munging
* LaTeX: Composition and typesetting of simple and complex documents
* LaTeX: Composition and typesetting of complex documents where fine control is needed
* Rmarkdown with knitr and Rstudio for statistical reports, handouts, presentations
* Linux: Operating system
* knitr LaTeX R: Reproducible research and reporting framework
* R code editor: RStudio and Emacs
r7 - 12 Dec 2017 - 07:12 by !FrankHarrell
ContinuingEdu
Main.ContinuingEdu Continuing Education Seminar Series Continuing Education Seminar Series are scheduled on the third Friday of each month at noon 1pm in the large ...
NEW - 11 Dec 2017 - 11:53 by !RunFan
Seminars
Plans





Continuing Education Seminar Series
r657 - 11 Dec 2017 - 11:16 by !RunFan
Education
* Bayesian methods
* Daily biostatistics clinics
Statistics at Vanderbilt
r36 - 08 Dec 2017 - 15:21 by !DalePlummer
DungengPeng
Main.DungengPeng DungengPeng
NEW - 07 Dec 2017 - 15:09 by !RegistrationAgent
r284 - 07 Dec 2017 - 15:09 by !AdminUser
CourseBios330Schedule
Lecture Date Time Notes
1 January 9 9:15 10:45
1 January 9 9:15 10:45
2 January 11 9:15 10:45
2 January 11 9:15 10:45
3 January 16 9:15 10:45
r28 - 07 Dec 2017 - 11:32 by !DalePlummer
LaurieSamuels
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%META:FILEATTACHMENT{name="LaurenRuthSamuelsCV.pdf" attachment="LaurenRuthSamuelsCV.pdf" attr="" comment="CV" date="1512571771" path="LaurenRuthSamuelsCV.pdf" si
r47 - 06 Dec 2017 - 08:49 by !LaurieSamuels
ShelbyPloucher
Main.ShelbyPloucher ShelbyPloucher
NEW - 05 Dec 2017 - 15:21 by !RegistrationAgent
DiagnosingTheTippingPointsOfDiseasesByDynamicNetworkBiomarkers
Main.DiagnosingTheTippingPointsOfDiseasesByDynamicNetworkBiomarkers Main.KathrynStoltzfus 04 Dec 2017 Diagnosing the tipping points of Diseases by Dynamic Network ...
NEW - 04 Dec 2017 - 11:48 by !KathrynStoltzfus
CourseBios341
Dec 1 Review and Discuss Homework Problems HW for lectures 24 25, and Lab 12
Dec 1 Lab 13 Approaches for generating a random sample 5.6 accept reject.R: Code to generate from Beta(2,2) distribution with Unif(0,1)
Dec 1 Lab 13 Approaches for generating a random sample 5.6 accept reject.R: Code to generate from Beta(2,2) distribution with Unif(0,1) ; accept rejec
Dec 4 27 Review and Discuss Homework Problems Code generating from biased Weibull distribution HW for lecture 26 and labs 13
Dec 11, 12 3 FINAL EXAM 2015 Exam and Solutions, 2014 Exam and Solutions, 2016 Exam and Solutions
r98 - 04 Dec 2017 - 11:19 by !BryanShepherd
PrescriberProfilingInTheChildWelfareSystemAndItsChallenges
Main.PrescriberProfilingInTheChildWelfareSystemAndItsChallenges Main.KathrynStoltzfus 01 Dec 2017 Prescriber profiling in the child welfare system and its challenges ...
NEW - 01 Dec 2017 - 09:57 by !KathrynStoltzfus
ThomasStewart
Thomas G. Stewart
ASSISTANT PROFESSORDepartment of BiostatisticsVanderbilt School of Medicine
ASSISTANT PROFESSORDepartment of BiostatisticsVanderbilt University School of Medicine
Important Links
r25 - 29 Nov 2017 - 18:05 by !ThomasStewart
EthanHuang
%META:TOPICPARENT{name="WikiUsers"}%
Yi (Ethan) Huang, M.S.
Yi (Ethan) Huang, M.S. Biostatistician II
Biostatistician II
Email:yi.huang@vanderbilt.edu Phone: (615) 875 8620 Vanderbilt University School of MedicineCenter for Quantitative Sciences2220 Pierce Avenue571 Pre
r5 - 29 Nov 2017 - 09:55 by !EthanHuang
CourseBios6321Spring2018
Main.CourseBios6321Spring2018
Main.CourseBios6321Spring2018
%META:TOPICPARENT{name="CourseBios6321"}%
BIOS 6321: Clinical trials and experimental design (Spring 2018)


For students only
r3 - 28 Nov 2017 - 14:28 by !TatsukiKoyama
RMSShortCourse2018
Vanderbilt Campus, Nashville, TN 37232
Registration
Registration


*Registration will open in early January
* Please email interest to Ashlee Bartley ( ashlee.bartley@vanderbilt.edu)
r3 - 28 Nov 2017 - 14:14 by !JillShell
ClinStat
* LTD_Paper.pdf: LTD_Paper.pdf
%META:FILEATTACHMENT{name="glossary.pdf" attachment="glossary.pdf" attr="" comment="Glossary of statistical terms" date="1511791663" path="glossary.pdf" size="21
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r161 - 28 Nov 2017 - 11:29 by !FrankHarrell
Projects
* Department of Orthopaedics and Rehabilitation
* Sports medicine projects related to outcomes of orthopedic surgery, especially for ACL reconstruction

* Orthopedic Trauma
r52 - 27 Nov 2017 - 13:45 by !DalePlummer
WarrenDunn
Main.WarrenDunn Warren R. Dunn, MD, MPH Assitant Professor of Orthopaedics Rehabilitation Assitant Professor of General Internal Medicine Public Heal Phone ...
r12 - 27 Nov 2017 - 13:39 by !DalePlummer
r7 - 27 Nov 2017 - 13:39 by !DalePlummer
CharlesDupontStuff
WebHome
WebPreferences MoonProj
WebPreferences MoonProj
deb ftp://ftp.nerim.net/debian marillat/ sarge main
r17 - 27 Nov 2017 - 13:39 by !DalePlummer
EBMlinks
Main.EBMlinks
%META:TOPICPARENT{name="SportsMedEBM"}%
%META:TOPICPARENT{name="Archive.SportsMedEBM"}%
Useful Links Relating to EBM Literature Reviews
r2 - 27 Nov 2017 - 13:35 by !DalePlummer
BasicSciClinicAnalyses

2017Dec01
Kristen Ogden, Pediatrics
*"We are exploring the frequency of viral gene segment reassortment during co infection and superinfection. The viral genome is made of ten segments (3 large,


2017Oct20
r176 - 27 Nov 2017 - 11:19 by !TatsukiKoyama
TatsukiRcode
TatsukiRcode
R code for tplot, kmplot, jmplot, dsplot, and show.colors()
R code for tplot, kmplot and other functions.
* RFunctions1.R: RFunctions1.R
R code for other miscellaneous functions.
* RFunctions071817.R: RFunctions071817.R
r152 - 25 Nov 2017 - 12:04 by !TatsukiKoyama
TheresaFields
Main.TheresaFields TheresaFields
NEW - 22 Nov 2017 - 11:24 by !RegistrationAgent
AdaptivelyMonitoringClinicalTrialsWithSecond-GenerationP-values
Main.AdaptivelyMonitoringClinicalTrialsWithSecond GenerationP values Main.KathrynStoltzfus 21 Nov 2017 As a work in progress, we introduce a novel adaptive clinical ...
NEW - 21 Nov 2017 - 09:28 by !KathrynStoltzfus
ArchivedAnalyses
Shepherd BE, Liu Q, Wanga V, Li C. Probability scale residuals in HIV/AIDS research: diagnostics and inference. Quantitative Methods for HIV/AIDS Research, edi
Caro Vega Y, Belaunzaran Zamudio PF, Crabtree Ramirez B, Shepherd BE, et al. Trends in proportion of older HIV infected people in care in Latin America and the
Fink V, Jenkins CA, et al. Survival after cancer diagnosis in a cohort of HIV infected individuals in Latin America. (submitted) R scripts
Belaunzaran Zamudio PF, Shepherd BE, Caro Vega YN, et al. Impact of late presentation and delayed antiretroviral therapy on mortality in adults receiving HIV c
Liu Q, Shepherd BE, Li C, Harrell FE. Modeling continuous response variables using ordinal regression. Statistics in Medicine. (in press) script files
Liu Q, Shepherd BE, Li C, Harrell FE. Modeling continuous response variables using ordinal regression. Statistics in Medicine 2017; 36: 4316 4335. script fil
r121 - 20 Nov 2017 - 11:39 by !BryanShepherd
InvitedPresenterItineraries
Invited Seminar Speakers and Biostatistics Guests
2018
* Roger Lewis, Thursday, January 4, 2018
2017
r112 - 20 Nov 2017 - 11:03 by !KathrynStoltzfus
FrankHarrell
* Distinguished Service to Translational Scientists Award, Vanderbilt University Medical Center, 2016
* 2017 Visionary Speaker, Clinical Studies Coordinating Center, University of North Carolina Department of Biostatistics, Chapel Hill
Blog Hobbies Pictures Computing Tools Bibliographic Database
Biography Brief Bio Very Brief Bio
Dr Harrell received a PhD in Biostatistics from the University of North Carolina in 1979 under the direction of PK Sen. He was co managing editor of the journal
Dr Harrell received a PhD in Biostatistics from the University of North Carolina in 1979 under the direction of PK Sen. He was co managing editor of the journal
r120 - 18 Nov 2017 - 08:05 by !FrankHarrell
ManuscriptChecklist
* Peter Norvig's Common Mistakes
* NEW Reflections from a Statistical Editor by Miguel Marino
r40 - 18 Nov 2017 - 07:40 by !FrankHarrell
StatCollabCourse
2017/11/27
* Poster Development and Critique
* No Class (Begin working on Poster; Typically Development and Critique)
2017/12/01
r114 - 17 Nov 2017 - 11:47 by !MarioDavidson
AmberHackstadt
Professional Interests
* Health Service Research
* Public Health Research
%META:FILEATTACHMENT{name="VandyCV_onlineversion.pdf" attachment="VandyCV_onlineversion.pdf" attr="" comment="" date="1497645966" path="VandyCV_onlineversion.pdf
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r8 - 15 Nov 2017 - 21:19 by !AmberHackstadt
ChrisSlaughter
Published Papers


1 Charles MK, Cooper WO, Jansson LM, Dudley J, Slaughter JC, Patrick SW. Male Sex Associated With Increased Risk of Neonatal Abstinence Syndrome. Hosp Pediat
1 Choksi Y, Slaughter JC, Vaezi MF and other. Esophageal Mucosal Impedance Patterns Discriminate Patients With Eosinophilic Esophagitis From Patients With GE
r160 - 15 Nov 2017 - 12:39 by !ChrisSlaughter

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